PHASAGE

PhasAGE – Excellence Hub on Phase Transitions in Aging and Age-Related Disorders

EDUCATIONAL RESOURCES

Repository of open educational resources – PowerPoint slides, audio and/or video materials –  from PhasAGE training actions.

TRAINING SCHOOLS

Training School 1 - Computational Methods to Study Protein Phase Separation

Lectures

Phase separation and emergent functions of Intrinsically Disordered Proteins | Peter Tompa Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

Overview of bioinformatics tools for the life sciences | Silvio Tosatto Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

Classification and evolution of non-globular proteins | Silvio Tosatto Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

Biophysical principles and molecular features of protein phase separation | Antonio Trovato Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

Short Linear motifs –  Identification and prediction | Bálint Mészáros Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

Phase separation in virus-host interactions | Sonia Longhi Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

Computational prediction and databases of protein phase separation | Alexander Monzon Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

Phase separation in diseases |Zsuzsanna Dosztanyi Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

Structure and protein interactions of repeated and low complexity regions | Vasilis Promponas Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

PRACTICAL SESSIONS

MobiDB: intrinsically disordered proteins in 2021| Alexander Monzon Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

Manually curated annotations of IDPs in DisProt and biological condensation functions | Federica Quaglia Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

Short linear motifs identification and prediction: practical sessions | Bálint Mészáros Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

Protein aggregation prediction | Salvador Ventura Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

Structure and protein interactions of repeated and low complexity regions | Vasilis Promponas Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

Computational prediction and databases of protein phase separation | Federica Quaglia Link 2 Icon - Free Icons Video Icon Icons - Download Free Vector Icons | Noun Project

Training School 2 - Biomolecular condensates in cell function, aging and disease

Lectures

Phase separations and transitions by viral proteins: from viral factories to interference with host cell functions  Video Icon Icons - Download Free Vector Icons | Noun Project

Condensation through liquid-liquid separation | Emil Stender  Video Icon Icons - Download Free Vector Icons | Noun Project

PRACTICAL SESSIONS

Experimental analysis of FUS liquid-liquid phase separation with INCell and Synergy 2 Link 2 Icon - Free Icons

Training School 3 - Barcelona Protein Aggregation Training School

PRACTICAL SESSIONS

Combining structural aggregation propensity and stability predictions to redesign protein solubility Link 2 Icon - Free Icons

In silico analysis to redesign protein solubility using AGGRESCAN 3D 2.0 Link 2 Icon - Free Icons

Redesign validation of Protein Activity, Stability, Solubility and Aggregation PropensityLink 2 Icon - Free Icons

Rational Design of an Aggregation-Resistant GFPLink 2 Icon - Free Icons

Training School 4 - Barcelona Protein Aggregation Training School

LECTURES

Conformational ensembles of IDPs: their implications for function and drug development Link 2 Icon - Free Icons

AI revolution and protein structure models Link 2 Icon - Free Icons

expert seminar series

Phase Separation: an emergent function of disordered proteins | Peter Tompa  Link 2 Icon - Free Icons YouTube – Apps no Google Play

Inhibition of age-associated genomic instability: emerging strategy to delay cellular senescence and aging | Elsa Logarinho  YouTube – Apps no Google Play

Dissecting the contribution of motor-cargo adaptors to microtubule-based transport in neurons | Reto Gassmann Link 2 Icon - Free Icons YouTube – Apps no Google Play

Intrinsic Protein Disorder and Conditional Folding in AlphaFoldDB | Silvio Tosatto Link 2 Icon - Free Icons

PHASAGE INTERNATIONAL CONFERENCE

The generic nature of the condensed state of proteins | Monika Fuxreiter Video Icon Icons - Download Free Vector Icons | Noun Project

Condensate targeting as a strategy to prevent irreversible protein aggregation: implications for ALS and FTD | Serena Carra Video Icon Icons - Download Free Vector Icons | Noun Project

Intrinsic disorder, phase separation and fibrillation by the Henipavirus V and W proteins | Sonia Longhi Video Icon Icons - Download Free Vector Icons | Noun Project

The Yin and Yang of RNA in neurodegeneration | Annalisa Pastore Video Icon Icons - Download Free Vector Icons | Noun Project

Design of novel functional amyloid assemblies | Salvador Ventura Video Icon Icons - Download Free Vector Icons | Noun Project

PED in 2024: improving the community deposition of structural ensembles for intrinsically disordered proteins | Alexander Monzon Video Icon Icons - Download Free Vector Icons | Noun Project

Talks

The generic nature of the condensed state of proteins | Monika Fuxreiter  YouTube – Apps no Google Play

Zenodo is an open-access repository developed under the European OpenAIRE program and maintained by CERN. All files deposited in Zenodo are assigned with a digital object identifier (DOI). PhasAGE Community is curated by the Project Coordinator and Project Manager.